Development of microsatellites markers for the deep coral Madracis myriaster (Pocilloporidae: Anthozoa).

In 2013 Colombia made an important step towards the construction and management of Marine Protected Areas (MPAs) by establishing the first Deep Corals National Park (PNNCP). Inside this MPA, the coral Madracis myriaster (Cnidaria: Pocilloporidae) was found as the main reef builder, offering habitat for many species of fish and invertebrates. In order to improve the study of deep-sea coral habitats, their connectivity and prospective management, nine new genetic markers (microsatellites) were developed for M. myriaster and tested in samples from PNNCP. We present the assessment of these markers, with a specificity for the deep coral, and its prospective use in future analysis for the PNNCP and other areas in the Caribbean and the Atlantic, where M. myriaster is reported. We also include an additional taxonomic analysis performed on samples of M. myriaster using scanning electron microscopy

New microsatellite markers for the shallow coral Madracis auretenra from the Caribbean.

Coral reefs species represent one-third of all marine species described in the ocean. They are also responsible for providing habitat and support to different species. Recently, Caribbean coral reefs ecosystems have suffered an alarming decrease in their populations as a result of overexploitation. Madracis auretenra in particular, is a widespread shallow coral in marine protected areas (MPAs) of the Caribbean. Due to the important role of MPAs as a biodiversity conservation tool, this species can be used as a model to estimate its dispersion/migration among Caribbean reefs through the use of informative genetic markers (microsatellites) specifically designed for it. Seventeen new polymorphic microsatellites markers for M. auretenra were developed and tested in 330 samples from Colombia, Guatemala, Curacao and Barbados. The gene diversity (1-D) ranged from 0.482 to 0.903, while the evenness ranged from 0.456 to 0.884 after clone removal. The expected heterozygosity (He) ranged from 0.347 to 0.742, while the observed heterozygosity (Ho) ranged from 0.078 to 0.578. The specificity of our microsatellites shows the potential use of these markers in a-posteriori analysis to detect population structure at different spatial scales, where M. auretenra is reported

Environmental education in its infancy at Lake Alaotra, Madagascar

Madagascar is renowned for its unique biodiversity but also for the continuous degradation of its natural environment and its high poverty rate. In order to achieve sustainable development, environmental education has been assigned a key role. In the lake Alaotra region, Madagascar’s most important rice and inland fish production area, primary schools are the sole formal education for the majority of the population. In order to gain an overview on the education of ‘tomorrow’s’ resource users, this study assessed the general state of the school system and of environmental education in particular. The focus was on understanding local definitions of environmental education, its application and local perceptions of environmental problems. Over 50 in - depth interviews were conducted using the Funnel approach with teachers from 18 public primary schools. The interviews were supplemented with focus groups and a participatory problem analysis workshop. Teachers in the Alaotra region provided a different definition of environmental education than the United Nations. Their focus is on social aspects rather than the actual problems of the natural environment, which represents a different point of view than non - governmental organizations (NGOs) from abroad, who are the main promoters of environmental education in the area. This indicates that education for sustainable development might be more suitable in the region than the currently promoted environmental education. When developing educational programs, it is important to include the teachers in the development processes to ensure inclusion of local views and needs. This will increase the probability that such programs are locally meaningful and useful.RÉSUMÉSi Madagascar est réputée pour sa biodiversité unique, elle l’est aussi pour la dégradation de son environnement naturel et son taux de pauvreté élevé. L’éducation à l’environnement est un élément important dans l’accès au développement durable. Dans la région Alaotra qui est le principal producteur de riz et de poissons d’eau douce de Madagascar, l’éducation est dispensée presqu’exclusivement par les écoles primaires pour la majorité de la population limitrophe du lac Alaotra. Pour comprendre globalement l’éducation des futurs utilisateurs des ressources, l’étude a évalué la situation qui prévaut dans le système scolaire en général et celui de l’éducation environnementale en particulier. Les travaux se sont concentrés sur les définitions locales de l’éducation environnementale, sa mise en oeuvre et les perceptions locales des problèmes environnementaux. Plus de 50 interviews détaillées ont été réalisées avec des enseignants de 18 écoles primaires sous méthode Funnel. Les interviews ont été complétées par des groupes de discussion et un atelier participatif portant sur l’analyse du problème. Les enseignants de la région de l’Alaotra ont énoncé une définition différente de l’éducation environnementale que celle proposée par les Nations Unies. Leur priorité porte davantage sur les aspects sociaux que sur les problèmes de l’environnement naturel lui-même, divergeant ainsi du point de vue des organisations non gouvernementales (ONG) étrangères, qui sont actuellement les principaux promoteurs de l’éducation environnementale dans la région. Il apparait ainsi que l’éducation portant sur le développement durable pourrait être plus appropriée que l’éducation environnementale. Lors de l’élaboration des programmes éducatifs, il est donc important d’inclure des enseignants pour veiller à ce que les visions et besoins locaux soient considérés, ce qui donnera plus de chances aux dits programmes de prendre du sens et de servir leur dessein

Population structure of the shallow coral Madracis auretenra in the Caribbean Sea

The shallow coral Madracis auretenra has an important role in the rich diversity of coral reef ecosystems found in the Caribbean Sea, providing habitat and support to different marine species. Improved understanding of the genetic structure of marine species in the region is needed for the design and management of marine reserves, which are usually created as a biodiversity conservation tool. In this study, seventeen new microsatellite markers were used to examine the population structure of M. auretenra through different areas in the Caribbean Sea (Guatemala, Colombia, Curacao and Barbados), analysing 313 samples from 18 localities. A significant differentiation and a clear clustering were found (k=11), indicating structure in the Caribbean sampled populations with high levels of inbreeding. A pattern of isolation by distance was present in all the localities but not identified in the stratified Mantel test, suggesting a major role of the physical barriers (e.g. currents, upwelling and rivers) in the genetic diversity distribution. Patterns of migration were found for Curacao, Barbados and some areas of Colombia. In contrast, some localities from Colombia (Varadero and Albuquerque) and Guatemala were identified as isolated. The population structure identified here highlights the importance of careful design and monitoring of marine reserves in the region and will help to guide further ecological analysis of shallow Caribbean coral formations.</jats:p

Internet-delivered guided self-help Acceptance and Commitment Therapy for family carers of people with dementia (iACT4CARERS): A qualitative study of carer views and acceptability

PURPOSE: To explore carers’ views and acceptability of internet-delivered, therapist-guided, self-help Acceptance and Commitment Therapy (ACT) for family carers of people with dementia (iACT4CARERS). METHODS: A qualitative approach with semi-structured interviews was employed with family carers (N = 23) taking part in a feasibility study of iACT4CARERS. The interviews were audio-recorded, transcribed and analysed using thematic analysis. RESULTS: Four overarching themes were identified: 1) usefulness and relevance of the content of the sessions, 2) sense of connectedness, 3) the impact of the intervention on participants and 4) acceptability of the online delivery. Positive carer experiences and intervention acceptability were facilitated by learning helpful ACT skills, perceiving the content of the session as relatable to the carers’ needs, feeling connected to other carers and the therapist during the intervention, noticing the benefits of the intervention and the user-friendliness of the online platform. Recommendations for a full-scale trial were identified, such as the inclusion of some “face-to-face” interactions (e.g., via video call) between carers and therapists to facilitate a bidirectional interaction and the provision of an additional aide-memoire to improve the learning experiences. CONCLUSION: Overall, the intervention was acceptable to the family carers. The proposed recommendations should be considered in a full-scale trial

Mathematical modeling tendencies in plant pathology

Nowadays plant diseases represent one of the major threats for crops around the world, because they carry healthy, economical, environmental and social problems. Considering this, it is necessary to have a description of the dynamics of plant disease in order to have sustainable strategies to prevent and diminish the impact of the diseases in crops. Mathematical tools have been employed to create models which give a description of epidemic dynamics; the commonly mathematical tools used are: Diseaseprogress curves, Linked Differential Equation (LDE), Area Under disease Progress Curve (AUDPC) and computer simulation. Nevertheless, there are other tools that have been employed in epidemiology of plant disease like: statistical tools, visual evaluations and pictorial assessment. Each tool has its own advantages and disadvantages. The nature of the problem and the epidemiologist necessities determine the mathematical tool to be used and the variables to be included into the model. This paperpresents review of the tools used in epidemiology of plant disease remarking their advantages and disadvantages and mathematical modeling tendencies in plant pathology

Analysis of end-to-end multi-domain management and orchestration frameworks for software defined infrastructures: An architectural survey

Over the last couple of years, industry operators' associations issued requirements towards an end-to-end management and orchestration plane for 5G networks. Consequently, standard organisations started their activities in this domain. This article provides an analysis and an architectural survey of these initiatives and of the main requirements, proposes descriptions for the key concepts of domain, resource and service slicing, end-to-end orchestration and a reference architecture for the end-to-end orchestration plane. Then, a set of currently available or under development domain orchestration frameworks are mapped to this reference architecture. These frameworks, meant to provide coordination and automated management of cloud and networking resources, network functions and services, fulfil multi-domain (i.e. multi-technology and multi-operator) orchestration requirements, thus enabling the realisation of an end-to-end orchestration plane. Finally, based on the analysis of existing single-domain and multi-domain orchestration components and requirements, this paper presents a functional architecture for the end-to-end management and orchestration plane, paving the way to its full realisation

The GEYSERS optical testbed: a platform for the integration, validation and demonstration of cloud-based infrastructure services

The recent evolution of cloud services is leading to a new service transformation paradigm to accommodate network infrastructures in a cost-scalable way. In this transformation, the network constitutes the key to efficiently connect users to services and applications. In this paper we describe the deployment, validation and demonstration of the optical integrated testbed for the “GEneralized architecture for dYnamic infrastructure SERviceS” (GEYSERS) project to accommodate such cloud based Infrastructure Services. The GEYSERS testbed is composed of a set of local physical testbeds allocated in the facilities of the GEYSERS partners. It is built up based on the requirements specification, architecture definition and per-layer development that constitutes the whole GEYSERS ecosystem, and validates the procedures on the GEYSERS prototypes. The testbed includes optical devices (layer 1), switches (layer 2), and IT resources deployed in different local testbeds provided by the project partners and interconnected among them to compose the whole testbed layout. The main goal of the GEYSERS testbed is twofold. On one hand, it aims at providing a validation ground for the architecture, concepts and business models proposed by GEYSERS, sustained by two main paradigms: Infrastructure as a Service (IaaS) and the coupled provisioning of optical network and IT resources. On the other hand, it is used as a demonstration platform for testing the software prototypes within the project and to demonstrate to the research and business community the project approach and solutions. In this work, we discuss our experience in the deployment of the testbed and share the results and insights learned from our trials in the process. Additionally, the paper highlights the most relevant experiments carried out in the testbed, aimed at the validation of the overall GEYSERS architecture

Disruption of the acetate kinase (ack) gene of Clostridium acetobutylicum results in delayed acetate production

In microorganisms, the enzyme acetate kinase (AK) catalyses the formation of ATP from ADP by de-phosphorylation of acetyl phosphate into acetic acid. A mutant strain of Clostridium acetobutylicum lacking acetate kinase activity is expected to have reduced acetate and acetone production compared to the wild type. In this work, a C. acetobutylicum mutant strain with a selectively disrupted ack gene, encoding AK, was constructed and genetically and physiologically characterized. The ack− strain showed a reduction in acetate kinase activity of more than 97% compared to the wild type. The fermentation profiles of the ack− and wild-type strain were compared using two different fermentation media, CGM and CM1. The latter contains acetate and has a higher iron and magnesium content than CGM. In general, fermentations by the mutant strain showed a clear shift in the timing of peak acetate production relative to butyrate and had increased acid uptake after the onset of solvent formation. Specifically, in acetate containing CM1 medium, acetate production was reduced by more than 80% compared to the wild type under the same conditions, but both strains produced similar final amounts of solvents. Fermentations in CGM showed similar peak acetate and butyrate levels, but increased acetoin (60%), ethanol (63%) and butanol (16%) production and reduced lactate (−50%) formation by the mutant compared to the wild type. These findings are in agreement with the proposed regulatory function of butyryl phosphate as opposed to acetyl phosphate in the metabolic switch of solventogenic clostridia